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Messages - pk

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General Discussion / Re: availability of FeatureREDUCE?
« on: July 18, 2018, 03:11:44 pm »
Thanks, Xiang-Jun, for the response!
I'll try asking the first author of the FeatureREDUCE manuscript about the current status of the software/project.

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General Discussion / availability of FeatureREDUCE?
« on: July 17, 2018, 05:34:01 pm »
If possible, I'd like to try running FeatureREDUCE (https://doi.org/10.7554/eLife.06397).

The Riley lab points to the older Bussemaker lab "Software" page (http://rileylab.org/featurereduce/), but that appears to be defunct. I assumed I'd be able to download the software from this forum along with the remaining REDUCE software suite. It doesn't appear to be in the downloadable tar balls. Should I not be trying to use FeatureREDUCE to analyze PBM data, i.e. is it excluded from the REDUCE suite for a reason, or am I just not seeing it?

I found a GitHub repo for the project (https://github.com/FeatureREDUCE/FeatureREDUCE), but it appears to be untouched since 2015 (the paper is still listed as "in revision" in the README). Is the GitHub repo the newest/only available implementation?

Thanks for the help!

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